Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 Gm24841-201ENSMUST00000158676 357 ntBASIC17.96■□□□□ 0.47
Nfkb1P25799 Gm18959-201ENSMUST00000208954 655 ntBASIC17.96■□□□□ 0.47
Nfkb1P25799 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nfkb1P25799 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.96■□□□□ 0.47
Nfkb1P25799 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nfkb1P25799 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nfkb1P25799 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.95■□□□□ 0.46
Nfkb1P25799 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Nfkb1P25799 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.95■□□□□ 0.46
Nfkb1P25799 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nfkb1P25799 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.95■□□□□ 0.46
Nfkb1P25799 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.94■□□□□ 0.46
Nfkb1P25799 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nfkb1P25799 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nfkb1P25799 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.93■□□□□ 0.46
Nfkb1P25799 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.93■□□□□ 0.46
Nfkb1P25799 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.93■□□□□ 0.46
Nfkb1P25799 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.93■□□□□ 0.46
Nfkb1P25799 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Nfkb1P25799 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nfkb1P25799 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.92■□□□□ 0.46
Nfkb1P25799 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nfkb1P25799 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nfkb1P25799 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.92■□□□□ 0.46
Nfkb1P25799 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nfkb1P25799 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nfkb1P25799 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nfkb1P25799 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.92■□□□□ 0.46
Nfkb1P25799 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Nfkb1P25799 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nfkb1P25799 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.92■□□□□ 0.46
Nfkb1P25799 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.92■□□□□ 0.46
Nfkb1P25799 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nfkb1P25799 Gm7638-201ENSMUST00000121348 967 ntBASIC17.91■□□□□ 0.46
Nfkb1P25799 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms