Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Irf8P23611 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.86■□□□□ 0.61
Irf8P23611 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf8P23611 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Irf8P23611 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Irf8P23611 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf8P23611 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.84■□□□□ 0.61
Irf8P23611 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.84■□□□□ 0.61
Irf8P23611 Gm21814-202ENSMUST00000203277 873 ntBASIC18.84■□□□□ 0.61
Irf8P23611 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.84■□□□□ 0.61
Irf8P23611 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Irf8P23611 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf8P23611 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Irf8P23611 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf8P23611 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf8P23611 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.83■□□□□ 0.6
Irf8P23611 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Irf8P23611 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf8P23611 Mir5122-201ENSMUST00000175004 89 ntBASIC18.83■□□□□ 0.6
Irf8P23611 Gm38027-201ENSMUST00000192315 235 ntBASIC18.83■□□□□ 0.6
Irf8P23611 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.83■□□□□ 0.6
Irf8P23611 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf8P23611 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf8P23611 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf8P23611 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.83■□□□□ 0.6
Irf8P23611 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf8P23611 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf8P23611 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Irf8P23611 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.82■□□□□ 0.6
Irf8P23611 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.82■□□□□ 0.6
Irf8P23611 Gm37025-201ENSMUST00000195159 829 ntBASIC18.82■□□□□ 0.6
Irf8P23611 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf8P23611 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Irf8P23611 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Irf8P23611 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Irf8P23611 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Irf8P23611 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.81■□□□□ 0.6
Irf8P23611 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.81■□□□□ 0.6
Irf8P23611 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Irf8P23611 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Irf8P23611 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Irf8P23611 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf8P23611 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf8P23611 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms