Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Gm13559-201ENSMUST00000120476 863 ntBASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Gm7889-201ENSMUST00000185591 958 ntBASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf9P20334 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfrsf9P20334 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Tnfrsf9P20334 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfrsf9P20334 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfrsf9P20334 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.2□□□□□ -0.14
Tnfrsf9P20334 BC021767-201ENSMUST00000126387 1716 ntBASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf9P20334 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf9P20334 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf9P20334 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms