Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.92■□□□□ 0.62
RaraP11416 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RaraP11416 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RaraP11416 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RaraP11416 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RaraP11416 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RaraP11416 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RaraP11416 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Gm10418-201ENSMUST00000100943 576 ntBASIC18.91■□□□□ 0.62
RaraP11416 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.91■□□□□ 0.62
RaraP11416 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RaraP11416 Gm37179-201ENSMUST00000194862 823 ntBASIC18.91■□□□□ 0.62
RaraP11416 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.91■□□□□ 0.62
RaraP11416 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RaraP11416 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.91■□□□□ 0.62
RaraP11416 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RaraP11416 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RaraP11416 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.91■□□□□ 0.62
RaraP11416 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.9■□□□□ 0.62
RaraP11416 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.9■□□□□ 0.62
RaraP11416 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RaraP11416 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RaraP11416 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RaraP11416 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RaraP11416 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.89■□□□□ 0.62
RaraP11416 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.89■□□□□ 0.62
RaraP11416 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RaraP11416 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.89■□□□□ 0.61
RaraP11416 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.89■□□□□ 0.61
RaraP11416 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RaraP11416 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RaraP11416 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RaraP11416 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RaraP11416 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RaraP11416 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RaraP11416 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RaraP11416 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RaraP11416 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RaraP11416 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RaraP11416 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RaraP11416 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RaraP11416 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.88■□□□□ 0.61
RaraP11416 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RaraP11416 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RaraP11416 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RaraP11416 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RaraP11416 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RaraP11416 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RaraP11416 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.87■□□□□ 0.61
RaraP11416 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.87■□□□□ 0.61
RaraP11416 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.87■□□□□ 0.61
RaraP11416 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.87■□□□□ 0.61
RaraP11416 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RaraP11416 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RaraP11416 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RaraP11416 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.87■□□□□ 0.61
RaraP11416 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RaraP11416 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RaraP11416 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
RaraP11416 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.86■□□□□ 0.61
RaraP11416 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RaraP11416 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms