Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxc6P10629 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.42■□□□□ 0.7
Hoxc6P10629 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hoxc6P10629 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Gm10566-201ENSMUST00000086739 996 ntBASIC19.42■□□□□ 0.7
Hoxc6P10629 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxc6P10629 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc6P10629 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hoxc6P10629 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Mir3081-201ENSMUST00000175305 84 ntBASIC19.41■□□□□ 0.7
Hoxc6P10629 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.41■□□□□ 0.7
Hoxc6P10629 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc6P10629 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hoxc6P10629 Actl10-202ENSMUST00000226583 1501 ntBASIC19.41■□□□□ 0.7
Hoxc6P10629 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc6P10629 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.4■□□□□ 0.7
Hoxc6P10629 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.4■□□□□ 0.7
Hoxc6P10629 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc6P10629 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc6P10629 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc6P10629 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc6P10629 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc6P10629 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc6P10629 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc6P10629 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc6P10629 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc6P10629 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hoxc6P10629 Gm27742-201ENSMUST00000184667 60 ntBASIC19.39■□□□□ 0.69
Hoxc6P10629 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.39■□□□□ 0.69
Hoxc6P10629 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.39■□□□□ 0.69
Hoxc6P10629 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc6P10629 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc6P10629 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.39■□□□□ 0.69
Hoxc6P10629 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.39■□□□□ 0.69
Hoxc6P10629 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc6P10629 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc6P10629 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hoxc6P10629 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.38■□□□□ 0.69
Hoxc6P10629 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.38■□□□□ 0.69
Hoxc6P10629 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.38■□□□□ 0.69
Hoxc6P10629 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc6P10629 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Hoxc6P10629 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Hoxc6P10629 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.37■□□□□ 0.69
Hoxc6P10629 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.37■□□□□ 0.69
Hoxc6P10629 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.37■□□□□ 0.69
Hoxc6P10629 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hoxc6P10629 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc6P10629 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hoxc6P10629 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc6P10629 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc6P10629 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc6P10629 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hoxc6P10629 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc6P10629 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hoxc6P10629 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc6P10629 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc6P10629 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Hoxc6P10629 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc6P10629 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms