Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Mir8112-201ENSMUST00000184382 131 ntBASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Gm21814-202ENSMUST00000203277 873 ntBASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Gm3375-201ENSMUST00000203929 796 ntBASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ly6c1P0CW02 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ly6c1P0CW02 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ly6c1P0CW02 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Gm15565-201ENSMUST00000118890 427 ntBASIC14.58□□□□□ -0.08
Ly6c1P0CW02 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ly6c1P0CW02 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Gm24841-201ENSMUST00000158676 357 ntBASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Odf3b-204ENSMUST00000227834 930 ntBASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ly6c1P0CW02 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ly6c1P0CW02 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Gm38027-201ENSMUST00000192315 235 ntBASIC14.55□□□□□ -0.08
Ly6c1P0CW02 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ly6c1P0CW02 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms