Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PdgfrbP05622 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PdgfrbP05622 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Mir8112-201ENSMUST00000184382 131 ntBASIC17.66■□□□□ 0.42
PdgfrbP05622 Gm37292-201ENSMUST00000192062 758 ntBASIC17.66■□□□□ 0.42
PdgfrbP05622 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.66■□□□□ 0.42
PdgfrbP05622 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PdgfrbP05622 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PdgfrbP05622 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PdgfrbP05622 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.65■□□□□ 0.42
PdgfrbP05622 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Gm27011-201ENSMUST00000182352 972 ntBASIC17.65■□□□□ 0.42
PdgfrbP05622 Gm10698-201ENSMUST00000182663 604 ntBASIC17.65■□□□□ 0.42
PdgfrbP05622 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.65■□□□□ 0.42
PdgfrbP05622 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.65■□□□□ 0.42
PdgfrbP05622 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PdgfrbP05622 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PdgfrbP05622 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PdgfrbP05622 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PdgfrbP05622 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PdgfrbP05622 Gm13168-201ENSMUST00000121771 632 ntBASIC17.64■□□□□ 0.41
PdgfrbP05622 Gm43183-201ENSMUST00000200632 547 ntBASIC17.64■□□□□ 0.41
PdgfrbP05622 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfrbP05622 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfrbP05622 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfrbP05622 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PdgfrbP05622 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PdgfrbP05622 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.64■□□□□ 0.41
PdgfrbP05622 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.63■□□□□ 0.41
PdgfrbP05622 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PdgfrbP05622 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.63■□□□□ 0.41
PdgfrbP05622 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PdgfrbP05622 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PdgfrbP05622 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.62■□□□□ 0.41
PdgfrbP05622 Gm12382-201ENSMUST00000122005 922 ntBASIC17.62■□□□□ 0.41
PdgfrbP05622 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.62■□□□□ 0.41
PdgfrbP05622 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PdgfrbP05622 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PdgfrbP05622 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PdgfrbP05622 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.6■□□□□ 0.41
PdgfrbP05622 Gm15378-201ENSMUST00000121894 207 ntBASIC17.6■□□□□ 0.41
PdgfrbP05622 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.6■□□□□ 0.41
PdgfrbP05622 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PdgfrbP05622 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms