Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna1P04756 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chrna1P04756 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna1P04756 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Chrna1P04756 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Chrna1P04756 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.79■□□□□ 0.6
Chrna1P04756 Gm17661-201ENSMUST00000170317 270 ntBASIC18.79■□□□□ 0.6
Chrna1P04756 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.79■□□□□ 0.6
Chrna1P04756 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.79■□□□□ 0.6
Chrna1P04756 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna1P04756 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.78■□□□□ 0.6
Chrna1P04756 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Chrna1P04756 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.78■□□□□ 0.6
Chrna1P04756 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chrna1P04756 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna1P04756 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.77■□□□□ 0.6
Chrna1P04756 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna1P04756 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.77■□□□□ 0.6
Chrna1P04756 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.77■□□□□ 0.59
Chrna1P04756 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chrna1P04756 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chrna1P04756 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chrna1P04756 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Chrna1P04756 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.76■□□□□ 0.59
Chrna1P04756 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Chrna1P04756 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Chrna1P04756 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chrna1P04756 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.76■□□□□ 0.59
Chrna1P04756 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.76■□□□□ 0.59
Chrna1P04756 Gm18101-201ENSMUST00000215769 548 ntBASIC18.76■□□□□ 0.59
Chrna1P04756 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chrna1P04756 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna1P04756 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.75■□□□□ 0.59
Chrna1P04756 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chrna1P04756 Gm13474-201ENSMUST00000122466 815 ntBASIC18.75■□□□□ 0.59
Chrna1P04756 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna1P04756 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna1P04756 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.75■□□□□ 0.59
Chrna1P04756 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna1P04756 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna1P04756 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna1P04756 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.74■□□□□ 0.59
Chrna1P04756 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.74■□□□□ 0.59
Chrna1P04756 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Chrna1P04756 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna1P04756 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.74■□□□□ 0.59
Chrna1P04756 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna1P04756 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.74■□□□□ 0.59
Chrna1P04756 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna1P04756 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chrna1P04756 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
Chrna1P04756 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna1P04756 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna1P04756 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna1P04756 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna1P04756 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna1P04756 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna1P04756 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms