Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cd74P04441 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd74P04441 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Cd74P04441 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Cd74P04441 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.68□□□□□ -0.06
Cd74P04441 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cd74P04441 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Flg-201ENSMUST00000050758 1488 ntBASIC14.68□□□□□ -0.06
Cd74P04441 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd74P04441 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cd74P04441 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Gm2399-201ENSMUST00000104944 225 ntBASIC14.67□□□□□ -0.06
Cd74P04441 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd74P04441 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.67□□□□□ -0.06
Cd74P04441 Gm6576-201ENSMUST00000169678 883 ntBASIC14.67□□□□□ -0.06
Cd74P04441 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.67□□□□□ -0.06
Cd74P04441 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cd74P04441 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd74P04441 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Gm15378-201ENSMUST00000121894 207 ntBASIC14.66□□□□□ -0.06
Cd74P04441 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.66□□□□□ -0.06
Cd74P04441 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Dancr-204ENSMUST00000132389 2347 ntBASIC14.66□□□□□ -0.06
Cd74P04441 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cd74P04441 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cd74P04441 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cd74P04441 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.66□□□□□ -0.06
Cd74P04441 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd74P04441 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cd74P04441 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd74P04441 Gm11249-201ENSMUST00000117071 859 ntBASIC14.65□□□□□ -0.06
Cd74P04441 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cd74P04441 Gm13158-201ENSMUST00000122007 736 ntBASIC14.65□□□□□ -0.06
Cd74P04441 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms