Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Gm5643-201ENSMUST00000117081 966 ntBASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.12■□□□□ 0.01
Igh-VJ558P01758 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Igh-VJ558P01758 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Gm29257-201ENSMUST00000186115 639 ntBASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Igh-VJ558P01758 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igh-VJ558P01758 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Gm12382-201ENSMUST00000122005 922 ntBASIC15.09■□□□□ 0.01
Igh-VJ558P01758 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Gm43183-201ENSMUST00000200632 547 ntBASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Igh-VJ558P01758 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Igh-VJ558P01758 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Igh-VJ558P01758 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.08■□□□□ 0.01
Igh-VJ558P01758 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Igh-VJ558P01758 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Igh-VJ558P01758 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igh-VJ558P01758 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Igh-VJ558P01758 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.08■□□□□ 0
Igh-VJ558P01758 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Igh-VJ558P01758 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.08■□□□□ 0
Igh-VJ558P01758 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.08■□□□□ 0
Igh-VJ558P01758 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.08■□□□□ 0
Igh-VJ558P01758 Gm4974-201ENSMUST00000209974 875 ntBASIC15.08■□□□□ 0
Igh-VJ558P01758 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igh-VJ558P01758 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Igh-VJ558P01758 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms