Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vti1aO89116 Gm12085-201ENSMUST00000119263 940 ntBASIC18.86■□□□□ 0.61
Vti1aO89116 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.86■□□□□ 0.61
Vti1aO89116 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.86■□□□□ 0.61
Vti1aO89116 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vti1aO89116 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vti1aO89116 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.85■□□□□ 0.61
Vti1aO89116 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.85■□□□□ 0.61
Vti1aO89116 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.85■□□□□ 0.61
Vti1aO89116 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.85■□□□□ 0.61
Vti1aO89116 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vti1aO89116 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.85■□□□□ 0.61
Vti1aO89116 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Vti1aO89116 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.84■□□□□ 0.61
Vti1aO89116 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.84■□□□□ 0.61
Vti1aO89116 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.84■□□□□ 0.61
Vti1aO89116 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.84■□□□□ 0.61
Vti1aO89116 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.84■□□□□ 0.61
Vti1aO89116 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vti1aO89116 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vti1aO89116 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vti1aO89116 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vti1aO89116 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.83■□□□□ 0.61
Vti1aO89116 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Vti1aO89116 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.83■□□□□ 0.61
Vti1aO89116 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Vti1aO89116 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vti1aO89116 Gm21362-201ENSMUST00000194272 928 ntBASIC18.83■□□□□ 0.6
Vti1aO89116 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.83■□□□□ 0.6
Vti1aO89116 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.83■□□□□ 0.6
Vti1aO89116 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vti1aO89116 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Vti1aO89116 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vti1aO89116 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vti1aO89116 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vti1aO89116 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vti1aO89116 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.82■□□□□ 0.6
Vti1aO89116 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vti1aO89116 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vti1aO89116 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.82■□□□□ 0.6
Vti1aO89116 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.81■□□□□ 0.6
Vti1aO89116 Gm18959-201ENSMUST00000208954 655 ntBASIC18.81■□□□□ 0.6
Vti1aO89116 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Gm7367-201ENSMUST00000057611 492 ntBASIC18.81■□□□□ 0.6
Vti1aO89116 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.81■□□□□ 0.6
Vti1aO89116 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vti1aO89116 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vti1aO89116 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.8■□□□□ 0.6
Vti1aO89116 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vti1aO89116 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vti1aO89116 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms