Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.68■□□□□ 0.42
Sp1O89090 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sp1O89090 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sp1O89090 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sp1O89090 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sp1O89090 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sp1O89090 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sp1O89090 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.68■□□□□ 0.42
Sp1O89090 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sp1O89090 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.68■□□□□ 0.42
Sp1O89090 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sp1O89090 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sp1O89090 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.67■□□□□ 0.42
Sp1O89090 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.67■□□□□ 0.42
Sp1O89090 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Gm45058-201ENSMUST00000205810 766 ntBASIC17.67■□□□□ 0.42
Sp1O89090 Il3ra-202ENSMUST00000223589 738 ntBASIC17.67■□□□□ 0.42
Sp1O89090 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sp1O89090 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sp1O89090 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sp1O89090 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sp1O89090 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sp1O89090 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.66■□□□□ 0.42
Sp1O89090 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sp1O89090 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.66■□□□□ 0.42
Sp1O89090 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sp1O89090 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sp1O89090 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.66■□□□□ 0.42
Sp1O89090 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.65■□□□□ 0.42
Sp1O89090 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.65■□□□□ 0.42
Sp1O89090 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sp1O89090 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.65■□□□□ 0.42
Sp1O89090 Gm17661-201ENSMUST00000170317 270 ntBASIC17.65■□□□□ 0.42
Sp1O89090 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.65■□□□□ 0.42
Sp1O89090 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.65■□□□□ 0.42
Sp1O89090 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Sp1O89090 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Sp1O89090 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Sp1O89090 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sp1O89090 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sp1O89090 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sp1O89090 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.42
Sp1O89090 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sp1O89090 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sp1O89090 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sp1O89090 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Sp1O89090 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.64■□□□□ 0.41
Sp1O89090 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sp1O89090 Mir5130-201ENSMUST00000175160 84 ntBASIC17.64■□□□□ 0.41
Sp1O89090 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sp1O89090 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sp1O89090 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sp1O89090 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sp1O89090 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.64■□□□□ 0.41
Sp1O89090 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sp1O89090 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sp1O89090 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.63■□□□□ 0.41
Sp1O89090 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.63■□□□□ 0.41
Sp1O89090 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
Sp1O89090 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.63■□□□□ 0.41
Sp1O89090 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sp1O89090 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp1O89090 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sp1O89090 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp1O89090 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Sp1O89090 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.62■□□□□ 0.41
Sp1O89090 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms