Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.07■□□□□ 0.48
CopeO89079 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CopeO89079 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CopeO89079 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CopeO89079 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.07■□□□□ 0.48
CopeO89079 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CopeO89079 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.06■□□□□ 0.48
CopeO89079 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.06■□□□□ 0.48
CopeO89079 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CopeO89079 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CopeO89079 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CopeO89079 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CopeO89079 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CopeO89079 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.06■□□□□ 0.48
CopeO89079 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CopeO89079 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.05■□□□□ 0.48
CopeO89079 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Gm29791-202ENSMUST00000207888 369 ntBASIC18.05■□□□□ 0.48
CopeO89079 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.05■□□□□ 0.48
CopeO89079 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.05■□□□□ 0.48
CopeO89079 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.05■□□□□ 0.48
CopeO89079 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CopeO89079 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CopeO89079 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CopeO89079 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.04■□□□□ 0.48
CopeO89079 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.04■□□□□ 0.48
CopeO89079 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Gm18671-201ENSMUST00000214826 683 ntBASIC18.04■□□□□ 0.48
CopeO89079 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CopeO89079 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CopeO89079 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CopeO89079 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.03■□□□□ 0.48
CopeO89079 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CopeO89079 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
CopeO89079 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CopeO89079 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.03■□□□□ 0.48
CopeO89079 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CopeO89079 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Gm10033-202ENSMUST00000211874 928 ntBASIC18.03■□□□□ 0.48
CopeO89079 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CopeO89079 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CopeO89079 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CopeO89079 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CopeO89079 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CopeO89079 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CopeO89079 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.02■□□□□ 0.48
CopeO89079 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CopeO89079 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.02■□□□□ 0.48
CopeO89079 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CopeO89079 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CopeO89079 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms