Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.81■□□□□ 0.28
Best1O88870 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Best1O88870 Gm18032-201ENSMUST00000222541 538 ntBASIC16.81■□□□□ 0.28
Best1O88870 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Best1O88870 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.81■□□□□ 0.28
Best1O88870 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Best1O88870 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
Best1O88870 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Best1O88870 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Best1O88870 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.8■□□□□ 0.28
Best1O88870 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
Best1O88870 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.8■□□□□ 0.28
Best1O88870 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.8■□□□□ 0.28
Best1O88870 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Best1O88870 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Best1O88870 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.79■□□□□ 0.28
Best1O88870 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Best1O88870 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Best1O88870 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Best1O88870 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.79■□□□□ 0.28
Best1O88870 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.78■□□□□ 0.28
Best1O88870 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Gm10013-201ENSMUST00000106074 672 ntBASIC16.78■□□□□ 0.28
Best1O88870 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Best1O88870 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Best1O88870 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Best1O88870 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.78■□□□□ 0.28
Best1O88870 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Best1O88870 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.77■□□□□ 0.28
Best1O88870 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Best1O88870 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Best1O88870 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.77■□□□□ 0.28
Best1O88870 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Best1O88870 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.77■□□□□ 0.28
Best1O88870 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Gm7370-201ENSMUST00000219471 767 ntBASIC16.77■□□□□ 0.28
Best1O88870 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.77■□□□□ 0.28
Best1O88870 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Best1O88870 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Best1O88870 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Best1O88870 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Best1O88870 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Best1O88870 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Best1O88870 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.76■□□□□ 0.27
Best1O88870 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Best1O88870 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms