Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.86■□□□□ 0.45
ShdO88834 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.86■□□□□ 0.45
ShdO88834 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.86■□□□□ 0.45
ShdO88834 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ShdO88834 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShdO88834 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.85■□□□□ 0.45
ShdO88834 Gm43183-201ENSMUST00000200632 547 ntBASIC17.85■□□□□ 0.45
ShdO88834 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ShdO88834 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShdO88834 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.84■□□□□ 0.45
ShdO88834 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.84■□□□□ 0.45
ShdO88834 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.84■□□□□ 0.45
ShdO88834 Gm12382-201ENSMUST00000122005 922 ntBASIC17.84■□□□□ 0.45
ShdO88834 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShdO88834 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShdO88834 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShdO88834 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShdO88834 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ShdO88834 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ShdO88834 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ShdO88834 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.83■□□□□ 0.44
ShdO88834 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ShdO88834 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ShdO88834 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShdO88834 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.82■□□□□ 0.44
ShdO88834 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.82■□□□□ 0.44
ShdO88834 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.82■□□□□ 0.44
ShdO88834 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ShdO88834 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Gm10812-201ENSMUST00000099864 546 ntBASIC17.82■□□□□ 0.44
ShdO88834 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ShdO88834 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShdO88834 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.82■□□□□ 0.44
ShdO88834 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.81■□□□□ 0.44
ShdO88834 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ShdO88834 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.81■□□□□ 0.44
ShdO88834 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ShdO88834 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Gm15378-201ENSMUST00000121894 207 ntBASIC17.8■□□□□ 0.44
ShdO88834 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.8■□□□□ 0.44
ShdO88834 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.8■□□□□ 0.44
ShdO88834 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ShdO88834 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShdO88834 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.8■□□□□ 0.44
ShdO88834 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ShdO88834 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms