Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.73■□□□□ 0.27
Hcn1O88704 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Flg-201ENSMUST00000050758 1488 ntBASIC16.73■□□□□ 0.27
Hcn1O88704 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Hcn1O88704 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Hcn1O88704 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.72■□□□□ 0.27
Hcn1O88704 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.72■□□□□ 0.27
Hcn1O88704 Gm8520-201ENSMUST00000186517 868 ntBASIC16.72■□□□□ 0.27
Hcn1O88704 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.72■□□□□ 0.27
Hcn1O88704 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hcn1O88704 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hcn1O88704 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.72■□□□□ 0.27
Hcn1O88704 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn1O88704 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.71■□□□□ 0.27
Hcn1O88704 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.71■□□□□ 0.27
Hcn1O88704 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Hcn1O88704 Gm13168-201ENSMUST00000121771 632 ntBASIC16.71■□□□□ 0.27
Hcn1O88704 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Hcn1O88704 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn1O88704 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hcn1O88704 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hcn1O88704 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.7■□□□□ 0.26
Hcn1O88704 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hcn1O88704 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hcn1O88704 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.7■□□□□ 0.26
Hcn1O88704 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.7■□□□□ 0.26
Hcn1O88704 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn1O88704 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Hcn1O88704 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Gm11927-201ENSMUST00000118472 759 ntBASIC16.69■□□□□ 0.26
Hcn1O88704 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.69■□□□□ 0.26
Hcn1O88704 Gm8969-201ENSMUST00000199694 526 ntBASIC16.69■□□□□ 0.26
Hcn1O88704 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn1O88704 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms