Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ClppO88696 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ClppO88696 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17■□□□□ 0.31
ClppO88696 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17■□□□□ 0.31
ClppO88696 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ClppO88696 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.99■□□□□ 0.31
ClppO88696 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ClppO88696 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ClppO88696 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ClppO88696 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Gm37292-201ENSMUST00000192062 758 ntBASIC16.99■□□□□ 0.31
ClppO88696 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.99■□□□□ 0.31
ClppO88696 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.99■□□□□ 0.31
ClppO88696 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ClppO88696 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.99■□□□□ 0.31
ClppO88696 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ClppO88696 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.98■□□□□ 0.31
ClppO88696 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ClppO88696 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.98■□□□□ 0.31
ClppO88696 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.98■□□□□ 0.31
ClppO88696 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ClppO88696 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.98■□□□□ 0.31
ClppO88696 Gm42545-201ENSMUST00000202755 922 ntBASIC16.98■□□□□ 0.31
ClppO88696 Timm23-208ENSMUST00000226683 750 ntBASIC16.98■□□□□ 0.31
ClppO88696 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ClppO88696 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
ClppO88696 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClppO88696 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 Gm6433-201ENSMUST00000118634 875 ntBASIC16.97■□□□□ 0.31
ClppO88696 Gm12382-201ENSMUST00000122005 922 ntBASIC16.97■□□□□ 0.31
ClppO88696 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.97■□□□□ 0.31
ClppO88696 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ClppO88696 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.97■□□□□ 0.31
ClppO88696 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Gm5417-201ENSMUST00000079706 384 ntBASIC16.97■□□□□ 0.31
ClppO88696 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
ClppO88696 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClppO88696 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.97■□□□□ 0.31
ClppO88696 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ClppO88696 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.96■□□□□ 0.31
ClppO88696 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClppO88696 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ClppO88696 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClppO88696 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClppO88696 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ClppO88696 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.96■□□□□ 0.31
ClppO88696 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.96■□□□□ 0.31
ClppO88696 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms