Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a20bO88575 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Gm43347-201ENSMUST00000200226 580 ntBASIC19.06■□□□□ 0.64
Slc6a20bO88575 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slc6a20bO88575 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Slc6a20bO88575 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.05■□□□□ 0.64
Slc6a20bO88575 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a20bO88575 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Slc6a20bO88575 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc6a20bO88575 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.05■□□□□ 0.64
Slc6a20bO88575 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.05■□□□□ 0.64
Slc6a20bO88575 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a20bO88575 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.05■□□□□ 0.64
Slc6a20bO88575 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a20bO88575 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a20bO88575 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a20bO88575 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.04■□□□□ 0.64
Slc6a20bO88575 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a20bO88575 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a20bO88575 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Gm12895-201ENSMUST00000122214 226 ntBASIC19.02■□□□□ 0.64
Slc6a20bO88575 Gm11452-201ENSMUST00000122376 690 ntBASIC19.02■□□□□ 0.64
Slc6a20bO88575 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a20bO88575 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a20bO88575 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a20bO88575 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a20bO88575 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a20bO88575 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a20bO88575 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a20bO88575 Tgds-204ENSMUST00000228543 1594 ntBASIC19.02■□□□□ 0.63
Slc6a20bO88575 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Gm27525-201ENSMUST00000184465 107 ntBASIC19.01■□□□□ 0.63
Slc6a20bO88575 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.01■□□□□ 0.63
Slc6a20bO88575 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a20bO88575 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms