Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cldn1O88551 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.95□□□□□ -0.02
Cldn1O88551 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.95□□□□□ -0.02
Cldn1O88551 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.95□□□□□ -0.02
Cldn1O88551 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cldn1O88551 Gm38027-201ENSMUST00000192315 235 ntBASIC14.95□□□□□ -0.02
Cldn1O88551 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cldn1O88551 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.95□□□□□ -0.02
Cldn1O88551 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldn1O88551 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cldn1O88551 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.94□□□□□ -0.02
Cldn1O88551 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.94□□□□□ -0.02
Cldn1O88551 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.94□□□□□ -0.02
Cldn1O88551 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cldn1O88551 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Golph3-205ENSMUST00000228671 2842 ntBASIC14.94□□□□□ -0.02
Cldn1O88551 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.94□□□□□ -0.02
Cldn1O88551 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.94□□□□□ -0.02
Cldn1O88551 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.94□□□□□ -0.02
Cldn1O88551 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cldn1O88551 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldn1O88551 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cldn1O88551 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.93□□□□□ -0.02
Cldn1O88551 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.93□□□□□ -0.02
Cldn1O88551 Gm28033-201ENSMUST00000184224 96 ntBASIC14.93□□□□□ -0.02
Cldn1O88551 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.93□□□□□ -0.02
Cldn1O88551 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.93□□□□□ -0.02
Cldn1O88551 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.93□□□□□ -0.02
Cldn1O88551 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.93□□□□□ -0.02
Cldn1O88551 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cldn1O88551 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cldn1O88551 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cldn1O88551 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cldn1O88551 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cldn1O88551 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cldn1O88551 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.92□□□□□ -0.02
Cldn1O88551 Gm27704-201ENSMUST00000185094 107 ntBASIC14.92□□□□□ -0.02
Cldn1O88551 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.92□□□□□ -0.02
Cldn1O88551 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Cldn1O88551 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Cldn1O88551 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.92□□□□□ -0.02
Cldn1O88551 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.92□□□□□ -0.02
Cldn1O88551 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cldn1O88551 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cldn1O88551 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cldn1O88551 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cldn1O88551 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cldn1O88551 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cldn1O88551 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms