Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.87■□□□□ 0.29
Dnmt3bO88509 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.87■□□□□ 0.29
Dnmt3bO88509 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dnmt3bO88509 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Gm12896-201ENSMUST00000118430 226 ntBASIC16.86■□□□□ 0.29
Dnmt3bO88509 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Gm27275-201ENSMUST00000184318 272 ntBASIC16.86■□□□□ 0.29
Dnmt3bO88509 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Dnmt3bO88509 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Dancr-204ENSMUST00000132389 2347 ntBASIC16.85■□□□□ 0.29
Dnmt3bO88509 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Idnk-204ENSMUST00000226010 1898 ntBASIC16.85■□□□□ 0.29
Dnmt3bO88509 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Dnmt3bO88509 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dnmt3bO88509 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Dnmt3bO88509 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.84■□□□□ 0.29
Dnmt3bO88509 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.84■□□□□ 0.29
Dnmt3bO88509 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dnmt3bO88509 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Dnmt3bO88509 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Dnmt3bO88509 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Dnmt3bO88509 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Dnmt3bO88509 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Gm5643-201ENSMUST00000117081 966 ntBASIC16.83■□□□□ 0.28
Dnmt3bO88509 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.83■□□□□ 0.28
Dnmt3bO88509 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dnmt3bO88509 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dnmt3bO88509 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.82■□□□□ 0.28
Dnmt3bO88509 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.82■□□□□ 0.28
Dnmt3bO88509 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dnmt3bO88509 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms