Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc4a4O88343 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc4a4O88343 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc4a4O88343 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc4a4O88343 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Slc4a4O88343 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc4a4O88343 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Slc4a4O88343 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.64■□□□□ 0.89
Slc4a4O88343 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Slc4a4O88343 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc4a4O88343 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.64■□□□□ 0.89
Slc4a4O88343 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc4a4O88343 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc4a4O88343 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slc4a4O88343 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slc4a4O88343 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Gm6433-201ENSMUST00000118634 875 ntBASIC20.63■□□□□ 0.89
Slc4a4O88343 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slc4a4O88343 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Slc4a4O88343 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.63■□□□□ 0.89
Slc4a4O88343 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.63■□□□□ 0.89
Slc4a4O88343 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc4a4O88343 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Slc4a4O88343 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Gm27463-201ENSMUST00000183569 57 ntBASIC20.62■□□□□ 0.89
Slc4a4O88343 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Slc4a4O88343 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slc4a4O88343 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.62■□□□□ 0.89
Slc4a4O88343 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc4a4O88343 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.61■□□□□ 0.89
Slc4a4O88343 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Slc4a4O88343 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc4a4O88343 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.61■□□□□ 0.89
Slc4a4O88343 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc4a4O88343 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc4a4O88343 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Slc4a4O88343 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.61■□□□□ 0.89
Slc4a4O88343 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc4a4O88343 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Slc4a4O88343 Gm13836-201ENSMUST00000121159 501 ntBASIC20.61■□□□□ 0.89
Slc4a4O88343 Gm7638-201ENSMUST00000121348 967 ntBASIC20.61■□□□□ 0.89
Slc4a4O88343 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.61■□□□□ 0.89
Slc4a4O88343 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.61■□□□□ 0.89
Slc4a4O88343 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc4a4O88343 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc4a4O88343 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.61■□□□□ 0.89
Slc4a4O88343 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc4a4O88343 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc4a4O88343 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.6■□□□□ 0.89
Slc4a4O88343 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc4a4O88343 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc4a4O88343 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc4a4O88343 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Slc4a4O88343 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc4a4O88343 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Slc4a4O88343 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc4a4O88343 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.59■□□□□ 0.89
Slc4a4O88343 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc4a4O88343 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc4a4O88343 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slc4a4O88343 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc4a4O88343 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc4a4O88343 Gm7889-201ENSMUST00000185591 958 ntBASIC20.59■□□□□ 0.89
Slc4a4O88343 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.59■□□□□ 0.89
Slc4a4O88343 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc4a4O88343 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc4a4O88343 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.59■□□□□ 0.89
Slc4a4O88343 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.58■□□□□ 0.89
Slc4a4O88343 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc4a4O88343 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc4a4O88343 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc4a4O88343 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc4a4O88343 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc4a4O88343 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc4a4O88343 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc4a4O88343 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Slc4a4O88343 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.58■□□□□ 0.89
Slc4a4O88343 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms