Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pknox1O70477 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pknox1O70477 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.38■□□□□ 0.37
Pknox1O70477 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pknox1O70477 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pknox1O70477 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pknox1O70477 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.37■□□□□ 0.37
Pknox1O70477 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Gm12933-201ENSMUST00000120203 872 ntBASIC17.37■□□□□ 0.37
Pknox1O70477 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.37■□□□□ 0.37
Pknox1O70477 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pknox1O70477 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pknox1O70477 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.37■□□□□ 0.37
Pknox1O70477 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.36■□□□□ 0.37
Pknox1O70477 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Pknox1O70477 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pknox1O70477 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pknox1O70477 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.36■□□□□ 0.37
Pknox1O70477 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pknox1O70477 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pknox1O70477 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Gm11927-201ENSMUST00000118472 759 ntBASIC17.35■□□□□ 0.37
Pknox1O70477 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.35■□□□□ 0.37
Pknox1O70477 Mir2861-201ENSMUST00000175539 82 ntBASIC17.35■□□□□ 0.37
Pknox1O70477 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.35■□□□□ 0.37
Pknox1O70477 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pknox1O70477 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pknox1O70477 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
Pknox1O70477 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.34■□□□□ 0.37
Pknox1O70477 Mir8112-201ENSMUST00000184382 131 ntBASIC17.34■□□□□ 0.37
Pknox1O70477 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pknox1O70477 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Pknox1O70477 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pknox1O70477 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Pknox1O70477 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pknox1O70477 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pknox1O70477 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pknox1O70477 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pknox1O70477 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pknox1O70477 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pknox1O70477 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.33■□□□□ 0.36
Pknox1O70477 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pknox1O70477 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.33■□□□□ 0.36
Pknox1O70477 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pknox1O70477 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pknox1O70477 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pknox1O70477 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Pknox1O70477 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pknox1O70477 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.33■□□□□ 0.36
Pknox1O70477 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms