Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.87■□□□□ 0.13
Pdlim3O70209 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.87■□□□□ 0.13
Pdlim3O70209 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pdlim3O70209 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pdlim3O70209 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.87■□□□□ 0.13
Pdlim3O70209 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Pdlim3O70209 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Gm7514-201ENSMUST00000209475 934 ntBASIC15.86■□□□□ 0.13
Pdlim3O70209 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pdlim3O70209 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.86■□□□□ 0.13
Pdlim3O70209 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Pdlim3O70209 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pdlim3O70209 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pdlim3O70209 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim3O70209 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim3O70209 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim3O70209 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.85■□□□□ 0.13
Pdlim3O70209 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim3O70209 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim3O70209 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.85■□□□□ 0.13
Pdlim3O70209 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pdlim3O70209 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pdlim3O70209 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pdlim3O70209 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
Pdlim3O70209 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Pdlim3O70209 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pdlim3O70209 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.84■□□□□ 0.13
Pdlim3O70209 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.84■□□□□ 0.13
Pdlim3O70209 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Gm10493-201ENSMUST00000097270 612 ntBASIC15.84■□□□□ 0.13
Pdlim3O70209 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.84■□□□□ 0.13
Pdlim3O70209 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pdlim3O70209 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdlim3O70209 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim3O70209 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.83■□□□□ 0.13
Pdlim3O70209 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim3O70209 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pdlim3O70209 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Pdlim3O70209 Mir8112-201ENSMUST00000184382 131 ntBASIC15.83■□□□□ 0.12
Pdlim3O70209 Gm29791-202ENSMUST00000207888 369 ntBASIC15.83■□□□□ 0.12
Pdlim3O70209 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.83■□□□□ 0.12
Pdlim3O70209 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pdlim3O70209 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pdlim3O70209 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim3O70209 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim3O70209 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.82■□□□□ 0.12
Pdlim3O70209 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim3O70209 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim3O70209 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.82■□□□□ 0.12
Pdlim3O70209 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.82■□□□□ 0.12
Pdlim3O70209 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.82■□□□□ 0.12
Pdlim3O70209 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pdlim3O70209 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms