Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Gm11950-201ENSMUST00000121615 838 ntBASIC19.28■□□□□ 0.68
Trdmt1O55055 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trdmt1O55055 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trdmt1O55055 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdmt1O55055 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.28■□□□□ 0.68
Trdmt1O55055 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trdmt1O55055 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trdmt1O55055 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trdmt1O55055 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.27■□□□□ 0.68
Trdmt1O55055 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trdmt1O55055 Gm18958-201ENSMUST00000174258 762 ntBASIC19.27■□□□□ 0.68
Trdmt1O55055 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Trdmt1O55055 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.27■□□□□ 0.68
Trdmt1O55055 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trdmt1O55055 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trdmt1O55055 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.26■□□□□ 0.67
Trdmt1O55055 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trdmt1O55055 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trdmt1O55055 Mir8112-201ENSMUST00000184382 131 ntBASIC19.26■□□□□ 0.67
Trdmt1O55055 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.26■□□□□ 0.67
Trdmt1O55055 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.26■□□□□ 0.67
Trdmt1O55055 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trdmt1O55055 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.25■□□□□ 0.67
Trdmt1O55055 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Gm18669-201ENSMUST00000216049 778 ntBASIC19.25■□□□□ 0.67
Trdmt1O55055 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trdmt1O55055 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdmt1O55055 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.24■□□□□ 0.67
Trdmt1O55055 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.24■□□□□ 0.67
Trdmt1O55055 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.24■□□□□ 0.67
Trdmt1O55055 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trdmt1O55055 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.24■□□□□ 0.67
Trdmt1O55055 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trdmt1O55055 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdmt1O55055 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.23■□□□□ 0.67
Trdmt1O55055 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdmt1O55055 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trdmt1O55055 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trdmt1O55055 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trdmt1O55055 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trdmt1O55055 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trdmt1O55055 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trdmt1O55055 Gm37722-201ENSMUST00000193757 208 ntBASIC19.22■□□□□ 0.67
Trdmt1O55055 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trdmt1O55055 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trdmt1O55055 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trdmt1O55055 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.22■□□□□ 0.67
Trdmt1O55055 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trdmt1O55055 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms