Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.49□□□□□ -0.09
SncaO55042 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SncaO55042 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Gm5874-201ENSMUST00000096101 508 ntBASIC14.48□□□□□ -0.09
SncaO55042 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.48□□□□□ -0.09
SncaO55042 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SncaO55042 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.47□□□□□ -0.09
SncaO55042 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.47□□□□□ -0.09
SncaO55042 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.47□□□□□ -0.09
SncaO55042 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.47□□□□□ -0.09
SncaO55042 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.47□□□□□ -0.09
SncaO55042 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SncaO55042 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.47□□□□□ -0.09
SncaO55042 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.47□□□□□ -0.09
SncaO55042 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.47□□□□□ -0.09
SncaO55042 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SncaO55042 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.46□□□□□ -0.09
SncaO55042 AV356131-201ENSMUST00000206201 750 ntBASIC14.46□□□□□ -0.09
SncaO55042 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.46□□□□□ -0.09
SncaO55042 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SncaO55042 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.46□□□□□ -0.09
SncaO55042 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SncaO55042 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SncaO55042 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.45□□□□□ -0.1
SncaO55042 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SncaO55042 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.45□□□□□ -0.1
SncaO55042 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SncaO55042 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SncaO55042 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.45□□□□□ -0.1
SncaO55042 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.45□□□□□ -0.1
SncaO55042 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SncaO55042 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SncaO55042 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SncaO55042 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.45□□□□□ -0.1
SncaO55042 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.45□□□□□ -0.1
SncaO55042 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SncaO55042 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SncaO55042 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SncaO55042 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms