Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1bO55017 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1bO55017 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cacna1bO55017 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.83■□□□□ 0.28
Cacna1bO55017 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cacna1bO55017 Gm5864-201ENSMUST00000202263 970 ntBASIC16.83■□□□□ 0.28
Cacna1bO55017 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1bO55017 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cacna1bO55017 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cacna1bO55017 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Cacna1bO55017 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.82■□□□□ 0.28
Cacna1bO55017 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Cacna1bO55017 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cacna1bO55017 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.82■□□□□ 0.28
Cacna1bO55017 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cacna1bO55017 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cacna1bO55017 Actl10-202ENSMUST00000226583 1501 ntBASIC16.82■□□□□ 0.28
Cacna1bO55017 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cacna1bO55017 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Cacna1bO55017 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1bO55017 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cacna1bO55017 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Cacna1bO55017 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Gm24841-201ENSMUST00000158676 357 ntBASIC16.81■□□□□ 0.28
Cacna1bO55017 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Gm37025-201ENSMUST00000195159 829 ntBASIC16.81■□□□□ 0.28
Cacna1bO55017 Gm43347-201ENSMUST00000200226 580 ntBASIC16.81■□□□□ 0.28
Cacna1bO55017 Gm9731-201ENSMUST00000209480 747 ntBASIC16.81■□□□□ 0.28
Cacna1bO55017 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cacna1bO55017 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1bO55017 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Cacna1bO55017 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.8■□□□□ 0.28
Cacna1bO55017 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cacna1bO55017 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.8■□□□□ 0.28
Cacna1bO55017 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1bO55017 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1bO55017 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.8■□□□□ 0.28
Cacna1bO55017 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1bO55017 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cacna1bO55017 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.79■□□□□ 0.28
Cacna1bO55017 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1bO55017 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1bO55017 Gm18733-201ENSMUST00000173950 856 ntBASIC16.79■□□□□ 0.28
Cacna1bO55017 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cacna1bO55017 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1bO55017 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms