Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ChkaO54804 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ChkaO54804 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.66■□□□□ 0.42
ChkaO54804 Gm10418-201ENSMUST00000100943 576 ntBASIC17.66■□□□□ 0.42
ChkaO54804 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ChkaO54804 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.66■□□□□ 0.42
ChkaO54804 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.66■□□□□ 0.42
ChkaO54804 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ChkaO54804 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
ChkaO54804 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ChkaO54804 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ChkaO54804 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.66■□□□□ 0.42
ChkaO54804 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ChkaO54804 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.65■□□□□ 0.42
ChkaO54804 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
ChkaO54804 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ChkaO54804 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ChkaO54804 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ChkaO54804 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.65■□□□□ 0.42
ChkaO54804 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.65■□□□□ 0.42
ChkaO54804 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.65■□□□□ 0.42
ChkaO54804 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ChkaO54804 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ChkaO54804 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ChkaO54804 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ChkaO54804 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkaO54804 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ChkaO54804 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ChkaO54804 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.64■□□□□ 0.42
ChkaO54804 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ChkaO54804 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Gm4968-201ENSMUST00000071458 858 ntBASIC17.64■□□□□ 0.41
ChkaO54804 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ChkaO54804 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ChkaO54804 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkaO54804 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ChkaO54804 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChkaO54804 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.63■□□□□ 0.41
ChkaO54804 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChkaO54804 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ChkaO54804 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChkaO54804 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.63■□□□□ 0.41
ChkaO54804 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.63■□□□□ 0.41
ChkaO54804 Gm2559-201ENSMUST00000201323 363 ntBASIC17.63■□□□□ 0.41
ChkaO54804 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChkaO54804 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ChkaO54804 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChkaO54804 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChkaO54804 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ChkaO54804 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.63■□□□□ 0.41
ChkaO54804 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
ChkaO54804 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.62■□□□□ 0.41
ChkaO54804 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ChkaO54804 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChkaO54804 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ChkaO54804 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ChkaO54804 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChkaO54804 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ChkaO54804 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChkaO54804 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ChkaO54804 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ChkaO54804 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChkaO54804 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChkaO54804 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ChkaO54804 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ChkaO54804 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ChkaO54804 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.61■□□□□ 0.41
ChkaO54804 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ChkaO54804 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms