Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a4O35874 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a4O35874 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a4O35874 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Slc1a4O35874 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Slc1a4O35874 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slc1a4O35874 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a4O35874 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a4O35874 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a4O35874 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a4O35874 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slc1a4O35874 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a4O35874 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.52■□□□□ 0.88
Slc1a4O35874 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.52■□□□□ 0.88
Slc1a4O35874 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Slc1a4O35874 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc1a4O35874 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a4O35874 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc1a4O35874 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a4O35874 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a4O35874 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.51■□□□□ 0.87
Slc1a4O35874 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Slc1a4O35874 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.51■□□□□ 0.87
Slc1a4O35874 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.51■□□□□ 0.87
Slc1a4O35874 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.51■□□□□ 0.87
Slc1a4O35874 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Slc1a4O35874 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a4O35874 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slc1a4O35874 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.5■□□□□ 0.87
Slc1a4O35874 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slc1a4O35874 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a4O35874 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Slc1a4O35874 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Slc1a4O35874 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Slc1a4O35874 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Gm38027-201ENSMUST00000192315 235 ntBASIC20.49■□□□□ 0.87
Slc1a4O35874 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.49■□□□□ 0.87
Slc1a4O35874 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
Slc1a4O35874 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a4O35874 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Slc1a4O35874 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Slc1a4O35874 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.48■□□□□ 0.87
Slc1a4O35874 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Slc1a4O35874 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a4O35874 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slc1a4O35874 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc1a4O35874 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Slc1a4O35874 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.47■□□□□ 0.87
Slc1a4O35874 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Slc1a4O35874 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a4O35874 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a4O35874 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a4O35874 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Slc1a4O35874 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms