Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Slc1a6O35544 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Gm7514-201ENSMUST00000209475 934 ntBASIC17.24■□□□□ 0.35
Slc1a6O35544 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.24■□□□□ 0.35
Slc1a6O35544 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.24■□□□□ 0.35
Slc1a6O35544 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a6O35544 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Slc1a6O35544 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc1a6O35544 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.23■□□□□ 0.35
Slc1a6O35544 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc1a6O35544 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a6O35544 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Slc1a6O35544 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.22■□□□□ 0.35
Slc1a6O35544 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc1a6O35544 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc1a6O35544 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc1a6O35544 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.22■□□□□ 0.35
Slc1a6O35544 Gm10493-201ENSMUST00000097270 612 ntBASIC17.22■□□□□ 0.35
Slc1a6O35544 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc1a6O35544 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a6O35544 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.21■□□□□ 0.35
Slc1a6O35544 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slc1a6O35544 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Slc1a6O35544 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc1a6O35544 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slc1a6O35544 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a6O35544 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc1a6O35544 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc1a6O35544 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Slc1a6O35544 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.2■□□□□ 0.34
Slc1a6O35544 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Slc1a6O35544 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slc1a6O35544 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a6O35544 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Slc1a6O35544 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Slc1a6O35544 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Slc1a6O35544 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms