Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Clk2O35491 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk2O35491 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Clk2O35491 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Clk2O35491 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.02■□□□□ 0.64
Clk2O35491 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk2O35491 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.02■□□□□ 0.64
Clk2O35491 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.02■□□□□ 0.64
Clk2O35491 Gm18032-201ENSMUST00000222541 538 ntBASIC19.02■□□□□ 0.64
Clk2O35491 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk2O35491 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk2O35491 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clk2O35491 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Clk2O35491 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk2O35491 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clk2O35491 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk2O35491 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.01■□□□□ 0.63
Clk2O35491 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clk2O35491 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clk2O35491 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Clk2O35491 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.01■□□□□ 0.63
Clk2O35491 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.01■□□□□ 0.63
Clk2O35491 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk2O35491 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.01■□□□□ 0.63
Clk2O35491 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Clk2O35491 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Clk2O35491 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Gm16061-201ENSMUST00000122167 857 ntBASIC19■□□□□ 0.63
Clk2O35491 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19■□□□□ 0.63
Clk2O35491 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Clk2O35491 Dapk1-207ENSMUST00000226059 5009 ntBASIC19■□□□□ 0.63
Clk2O35491 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Clk2O35491 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clk2O35491 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Clk2O35491 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.99■□□□□ 0.63
Clk2O35491 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.99■□□□□ 0.63
Clk2O35491 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clk2O35491 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.99■□□□□ 0.63
Clk2O35491 Gm6659-201ENSMUST00000174752 547 ntBASIC18.99■□□□□ 0.63
Clk2O35491 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.99■□□□□ 0.63
Clk2O35491 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.99■□□□□ 0.63
Clk2O35491 Gm7370-201ENSMUST00000219471 767 ntBASIC18.99■□□□□ 0.63
Clk2O35491 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.99■□□□□ 0.63
Clk2O35491 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk2O35491 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.98■□□□□ 0.63
Clk2O35491 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Clk2O35491 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clk2O35491 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clk2O35491 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.98■□□□□ 0.63
Clk2O35491 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Clk2O35491 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.98■□□□□ 0.63
Clk2O35491 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk2O35491 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk2O35491 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clk2O35491 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.97■□□□□ 0.63
Clk2O35491 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Clk2O35491 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clk2O35491 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk2O35491 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms