Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11aO35305 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11aO35305 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11aO35305 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Gm24841-201ENSMUST00000158676 357 ntBASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf11aO35305 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Gm12085-201ENSMUST00000119263 940 ntBASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11aO35305 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf11aO35305 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf11aO35305 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf11aO35305 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf11aO35305 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11aO35305 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms