Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf11O35235 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Gm27454-201ENSMUST00000185090 204 ntBASIC13.66□□□□□ -0.22
Tnfsf11O35235 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.66□□□□□ -0.22
Tnfsf11O35235 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf11O35235 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Tnfsf11O35235 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf11O35235 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tnfsf11O35235 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Gm26833-201ENSMUST00000180899 440 ntBASIC13.64□□□□□ -0.23
Tnfsf11O35235 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf11O35235 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.63□□□□□ -0.23
Tnfsf11O35235 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Tnfsf11O35235 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.63□□□□□ -0.23
Tnfsf11O35235 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Gm6139-201ENSMUST00000079261 882 ntBASIC13.63□□□□□ -0.23
Tnfsf11O35235 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms