Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trove2O08848 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trove2O08848 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trove2O08848 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trove2O08848 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trove2O08848 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Gm6420-201ENSMUST00000193885 723 ntBASIC17.92■□□□□ 0.46
Trove2O08848 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.92■□□□□ 0.46
Trove2O08848 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.92■□□□□ 0.46
Trove2O08848 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trove2O08848 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trove2O08848 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.91■□□□□ 0.46
Trove2O08848 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.91■□□□□ 0.46
Trove2O08848 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trove2O08848 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.9■□□□□ 0.46
Trove2O08848 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trove2O08848 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.9■□□□□ 0.46
Trove2O08848 Gm15039-201ENSMUST00000118914 875 ntBASIC17.9■□□□□ 0.46
Trove2O08848 Nespas-201ENSMUST00000143738 1083 ntBASIC17.9■□□□□ 0.46
Trove2O08848 Gm8495-201ENSMUST00000188740 694 ntBASIC17.9■□□□□ 0.46
Trove2O08848 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trove2O08848 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trove2O08848 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trove2O08848 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trove2O08848 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trove2O08848 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.89■□□□□ 0.45
Trove2O08848 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trove2O08848 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.89■□□□□ 0.45
Trove2O08848 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.89■□□□□ 0.45
Trove2O08848 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trove2O08848 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms