Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Ebf3O08791 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ebf3O08791 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Ebf3O08791 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.12■□□□□ 0.49
Ebf3O08791 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.12■□□□□ 0.49
Ebf3O08791 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ebf3O08791 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ebf3O08791 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf3O08791 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf3O08791 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf3O08791 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.11■□□□□ 0.49
Ebf3O08791 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.11■□□□□ 0.49
Ebf3O08791 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf3O08791 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.11■□□□□ 0.49
Ebf3O08791 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.11■□□□□ 0.49
Ebf3O08791 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.11■□□□□ 0.49
Ebf3O08791 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ebf3O08791 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf3O08791 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.11■□□□□ 0.49
Ebf3O08791 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.11■□□□□ 0.49
Ebf3O08791 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf3O08791 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf3O08791 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ebf3O08791 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf3O08791 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Gm38027-201ENSMUST00000192315 235 ntBASIC18.1■□□□□ 0.49
Ebf3O08791 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.1■□□□□ 0.49
Ebf3O08791 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf3O08791 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf3O08791 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf3O08791 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf3O08791 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ebf3O08791 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf3O08791 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.09■□□□□ 0.49
Ebf3O08791 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.09■□□□□ 0.49
Ebf3O08791 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.09■□□□□ 0.49
Ebf3O08791 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ebf3O08791 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ebf3O08791 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf3O08791 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf3O08791 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf3O08791 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Ebf3O08791 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ebf3O08791 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf3O08791 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf3O08791 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf3O08791 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
Ebf3O08791 Gm23634-201ENSMUST00000175071 91 ntBASIC18.08■□□□□ 0.48
Ebf3O08791 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.08■□□□□ 0.48
Ebf3O08791 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf3O08791 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.07■□□□□ 0.48
Ebf3O08791 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ebf3O08791 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ebf3O08791 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ebf3O08791 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.07■□□□□ 0.48
Ebf3O08791 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ebf3O08791 Gm45058-201ENSMUST00000205810 766 ntBASIC18.07■□□□□ 0.48
Ebf3O08791 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.07■□□□□ 0.48
Ebf3O08791 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf3O08791 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.06■□□□□ 0.48
Ebf3O08791 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms