Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.78■□□□□ 0.28
Polr2jO08740 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Polr2jO08740 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.78■□□□□ 0.28
Polr2jO08740 Gm7291-201ENSMUST00000199147 382 ntBASIC16.78■□□□□ 0.28
Polr2jO08740 AV356131-201ENSMUST00000206201 750 ntBASIC16.78■□□□□ 0.28
Polr2jO08740 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
Polr2jO08740 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Polr2jO08740 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Polr2jO08740 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Polr2jO08740 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Polr2jO08740 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Polr2jO08740 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Polr2jO08740 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Polr2jO08740 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Polr2jO08740 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.77■□□□□ 0.28
Polr2jO08740 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.77■□□□□ 0.28
Polr2jO08740 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Polr2jO08740 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Polr2jO08740 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.77■□□□□ 0.28
Polr2jO08740 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Polr2jO08740 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Polr2jO08740 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Polr2jO08740 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Polr2jO08740 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Polr2jO08740 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Polr2jO08740 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Polr2jO08740 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Polr2jO08740 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.76■□□□□ 0.27
Polr2jO08740 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Polr2jO08740 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.76■□□□□ 0.27
Polr2jO08740 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.76■□□□□ 0.27
Polr2jO08740 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Polr2jO08740 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Gm2399-201ENSMUST00000104944 225 ntBASIC16.76■□□□□ 0.27
Polr2jO08740 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Polr2jO08740 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.76■□□□□ 0.27
Polr2jO08740 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.76■□□□□ 0.27
Polr2jO08740 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.76■□□□□ 0.27
Polr2jO08740 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Polr2jO08740 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Polr2jO08740 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.76■□□□□ 0.27
Polr2jO08740 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Polr2jO08740 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Polr2jO08740 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.75■□□□□ 0.27
Polr2jO08740 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.75■□□□□ 0.27
Polr2jO08740 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.75■□□□□ 0.27
Polr2jO08740 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Gm10418-201ENSMUST00000100943 576 ntBASIC16.75■□□□□ 0.27
Polr2jO08740 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.75■□□□□ 0.27
Polr2jO08740 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Polr2jO08740 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Polr2jO08740 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.74■□□□□ 0.27
Polr2jO08740 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.74■□□□□ 0.27
Polr2jO08740 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.74■□□□□ 0.27
Polr2jO08740 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Zfp783-201ENSMUST00000095946 670 ntBASIC16.74■□□□□ 0.27
Polr2jO08740 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms