Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Sh3yl1O08641 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.63■□□□□ 0.25
Sh3yl1O08641 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3yl1O08641 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sh3yl1O08641 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sh3yl1O08641 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3yl1O08641 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Gm10138-203ENSMUST00000206952 366 ntBASIC16.61■□□□□ 0.25
Sh3yl1O08641 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sh3yl1O08641 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3yl1O08641 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Gm15378-201ENSMUST00000121894 207 ntBASIC16.6■□□□□ 0.25
Sh3yl1O08641 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.6■□□□□ 0.25
Sh3yl1O08641 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3yl1O08641 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Gm15375-201ENSMUST00000119510 849 ntBASIC16.59■□□□□ 0.25
Sh3yl1O08641 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.59■□□□□ 0.25
Sh3yl1O08641 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3yl1O08641 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms