Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Gm6433-201ENSMUST00000118634 875 ntBASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Gm27463-201ENSMUST00000183569 57 ntBASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb9E9Q5G2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcdhb9E9Q5G2 Rarb-207ENSMUST00000225921 2756 ntBASIC20.58■□□□□ 0.88
Pcdhb9E9Q5G2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.58■□□□□ 0.88
Pcdhb9E9Q5G2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb9E9Q5G2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Gm37025-201ENSMUST00000195159 829 ntBASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.57■□□□□ 0.88
Pcdhb9E9Q5G2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Gm7791-201ENSMUST00000219066 539 ntBASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb9E9Q5G2 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Gm9987-201ENSMUST00000069768 567 ntBASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb9E9Q5G2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Gm8969-201ENSMUST00000199694 526 ntBASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb9E9Q5G2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Gm17661-201ENSMUST00000170317 270 ntBASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Gm9731-201ENSMUST00000209480 747 ntBASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb9E9Q5G2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms