Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cpsf4lE9Q2N0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4lE9Q2N0 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.77□□□□□ -0.04
Cpsf4lE9Q2N0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Cpsf4lE9Q2N0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4lE9Q2N0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4lE9Q2N0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4lE9Q2N0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4lE9Q2N0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cpsf4lE9Q2N0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Cpsf4lE9Q2N0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms