Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Mir5131-201ENSMUST00000175426 93 ntBASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap3E9PY62 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Cntnap3E9PY62 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap3E9PY62 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Rps4l-201ENSMUST00000071745 943 ntBASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap3E9PY62 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.17■□□□□ 0.66
Cntnap3E9PY62 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap3E9PY62 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap3E9PY62 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Il3ra-202ENSMUST00000223589 738 ntBASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap3E9PY62 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms