Protein–RNA interactions for Protein: E9PW43

Gm10320, Protein transport protein Sec61 subunit beta, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10320E9PW43 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm10320E9PW43 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Gm22325-201ENSMUST00000158904 308 ntBASIC11.1□□□□□ -0.63
Gm10320E9PW43 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm10320E9PW43 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.09□□□□□ -0.63
Gm10320E9PW43 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm10320E9PW43 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.08□□□□□ -0.63
Gm10320E9PW43 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10320E9PW43 Gm13146-201ENSMUST00000118508 780 ntBASIC11.08□□□□□ -0.64
Gm10320E9PW43 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Gm10320E9PW43 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms