Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Gm15372-201ENSMUST00000120729 834 ntBASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Gm19721-201ENSMUST00000195284 1764 ntBASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hfm1D3Z4R1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Gm43272-201ENSMUST00000200599 1584 ntBASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hfm1D3Z4R1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hfm1D3Z4R1 Gm27525-201ENSMUST00000184465 107 ntBASIC24.54■■□□□ 1.52
Hfm1D3Z4R1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Hfm1D3Z4R1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC24.54■■□□□ 1.52
Hfm1D3Z4R1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Hfm1D3Z4R1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hfm1D3Z4R1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC24.53■■□□□ 1.52
Hfm1D3Z4R1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Hfm1D3Z4R1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.53■■□□□ 1.52
Hfm1D3Z4R1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Hfm1D3Z4R1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hfm1D3Z4R1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Idnk-204ENSMUST00000226010 1898 ntBASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Gm10616-201ENSMUST00000205285 2127 ntBASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hfm1D3Z4R1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hfm1D3Z4R1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Gm11452-201ENSMUST00000122376 690 ntBASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Gm10052-201ENSMUST00000168019 960 ntBASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms