Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rrn3B2RS91 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.56■□□□□ 0.4
Rrn3B2RS91 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rrn3B2RS91 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Fst-202ENSMUST00000223640 2612 ntBASIC17.55■□□□□ 0.4
Rrn3B2RS91 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.55■□□□□ 0.4
Rrn3B2RS91 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.54■□□□□ 0.4
Rrn3B2RS91 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rrn3B2RS91 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Gm29791-202ENSMUST00000207888 369 ntBASIC17.53■□□□□ 0.4
Rrn3B2RS91 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rrn3B2RS91 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Gm715-201ENSMUST00000117865 831 ntBASIC17.52■□□□□ 0.4
Rrn3B2RS91 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rrn3B2RS91 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrn3B2RS91 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms