Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Dio3-201ENSMUST00000097228 1449 ntBASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Gm12441-201ENSMUST00000121806 588 ntBASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Slc9a6A1L3P4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Slc9a6A1L3P4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc9a6A1L3P4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Gm29257-201ENSMUST00000186115 639 ntBASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.44■□□□□ 0.22
Slc9a6A1L3P4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc9a6A1L3P4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc9a6A1L3P4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc9a6A1L3P4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc9a6A1L3P4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc9a6A1L3P4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc9a6A1L3P4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc9a6A1L3P4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms