Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav12d-1A0N8R0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav12d-1A0N8R0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-1A0N8R0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12d-1A0N8R0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12d-1A0N8R0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav12d-1A0N8R0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms