Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28729A0A1B0GSW2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Gm28729A0A1B0GSW2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm28729A0A1B0GSW2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm28729A0A1B0GSW2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28729A0A1B0GSW2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28729A0A1B0GSW2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28729A0A1B0GSW2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm5587-201ENSMUST00000206270 674 ntBASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28729A0A1B0GSW2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28729A0A1B0GSW2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm29518-201ENSMUST00000190858 372 ntBASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm27741-201ENSMUST00000185060 237 ntBASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28729A0A1B0GSW2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Mir8112-201ENSMUST00000184382 131 ntBASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Gm27704-201ENSMUST00000185094 107 ntBASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28729A0A1B0GSW2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Gm28729A0A1B0GSW2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.02■□□□□ 0.32
Gm28729A0A1B0GSW2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28729A0A1B0GSW2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28729A0A1B0GSW2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Gm28729A0A1B0GSW2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms