Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm7977-201ENSMUST00000193787 748 ntBASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-4A0A0G2JG01 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm2399-201ENSMUST00000104944 225 ntBASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-4A0A0G2JG01 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tgds-204ENSMUST00000228543 1594 ntBASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-4A0A0G2JG01 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav13n-4A0A0G2JG01 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms