Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav19A0A0B4J1K4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav19A0A0B4J1K4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav19A0A0B4J1K4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav19A0A0B4J1K4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Gm42778-201ENSMUST00000199644 553 ntBASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav19A0A0B4J1K4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms