Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv20A0A0B4J1H5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm26833-201ENSMUST00000180899 440 ntBASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv20A0A0B4J1H5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Mir8112-201ENSMUST00000184382 131 ntBASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv20A0A0B4J1H5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv20A0A0B4J1H5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms