Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv16A0A0B4J1H3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm7290-201ENSMUST00000104990 617 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm12918-201ENSMUST00000120234 636 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm15710-201ENSMUST00000121821 636 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm5075-201ENSMUST00000196916 622 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv16A0A0B4J1H3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Zfp783-201ENSMUST00000095946 670 ntBASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trbv16A0A0B4J1H3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv16A0A0B4J1H3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Trbv16A0A0B4J1H3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms