Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv1A0A0B4J1G7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trbv1A0A0B4J1G7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Gm13534-201ENSMUST00000121169 513 ntBASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Gm8495-201ENSMUST00000188740 694 ntBASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbv1A0A0B4J1G7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv1A0A0B4J1G7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv1A0A0B4J1G7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv1A0A0B4J1G7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv1A0A0B4J1G7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv1A0A0B4J1G7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Gm10033-202ENSMUST00000211874 928 ntBASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv1A0A0B4J1G7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms